Mobicols & Laboratory Columns Citations

Mobicols, MobiSpin Columns, and Other Columns

• Ahn J, Wong JT, Molday RS. The effect of lipid environment and retinoids on the ATPase activity of ABCR, the photoreceptor ABC transporter responsible for Stargardt macular dystrophy. J Biol Chem. 2000;275(27):20399-20405. doi:10.1074/jbc.M000555200
• Axelsson J, Ferreira M, Adolfsson L, McCrea K, Ward R, Larm O. Cytokines in blood from septic patients interact with surface-immobilized heparin. ASAIO J. 2010;56(1):48-51. doi:10.1097/MAT.0b013e3181c3fec8
• Bartsch C, Szabo K, Dinh-Thanh M, Schrader C, Trojnar E, Johne R. Comparison and optimization of detection methods for noroviruses in frozen strawberries containing different amounts of RT-PCR inhibitors. Food Microbiol. 2016;60:124-130. doi:10.1016/j.fm.2016.07.005
• Bauer N, Škiljaica A, Malenica N, et al. The MATH-BTB Protein TaMAB2 Accumulates in Ubiquitin-Containing Foci and Interacts With the Translation Initiation Machinery in Arabidopsis. Front Plant Sci. 2019;10:1469. Published 2019 Nov 22. doi:10.3389/fpls.2019.01469
• Bertelsen ER, Deodhar G, Kluherz KT, et al. Microcolumn lanthanide separation using bis-(2-ethylhexyl) phosphoric acid functionalized ordered mesoporous carbon materials. J Chromatogr A. 2019;1595:248-256. doi:10.1016/j.chroma.2019.02.057
• Chakrabarti S, Dudzic JP, Li X, Collas EJ, Boquete JP, Lemaitre B. Remote Control of Intestinal Stem Cell Activity by Haemocytes in Drosophila. PLoS Genet. 2016;12(5):e1006089. Published 2016 May 27. doi:10.1371/journal.pgen.1006089
• Chen D, Bryden W, McLoughlin M. A Novel System for The Comprehensive Collection of Nonvolatile Molecules from Human Exhaled Breath. 2020. doi:10.1101/2020.05.14.097113
• Christodoulou A, Yokoyama H. Purification of nuclear localization signal-containing proteins and its application to investigation of the mechanisms of the cell division cycle. Small GTPases. 2015;6(1):20-27. doi:10.4161/21541248.2014.978162
• Cibulka J, Bisaccia F, Radisavljević K, Gudino Carrillo RM, Köhler A. Assembly principle of a membrane-anchored nuclear pore basket scaffold. Sci Adv. 2022;8(6):eabl6863. doi:10.1126/sciadv.abl6863
• Crowther GJ, Hillesland HK, Keyloun KR, et al. Biochemical Screening of Five Protein Kinases from Plasmodium falciparum against 14,000 Cell-Active Compounds. PLoS One. 2016;11(3):e0149996. Published 2016 Mar 2. doi:10.1371/journal.pone.0149996
• De Pasquale D, Marino A, Tapeinos C et al. Homotypic targeting and drug delivery in glioblastoma cells through cell membrane-coated boron nitride nanotubes. Mater Des. 2020;192:108742. doi:10.1016/j.matdes.2020.108742
• Dedecker M, Van Leene J, De Winne N, et al. Transferring an optimized TAP-toolbox for the isolation of protein complexes to a portfolio of rice tissues. Plant Mol Biol. 2016;91(3):341-354. doi:10.1007/s11103-016-0471-x
• Defaus S, Avilés M, Andreu D, Gutiérrez-Gallego R. Identification of Bovine Sperm Surface Proteins Involved in Carbohydrate-mediated Fertilization Interactions. Mol Cell Proteomics. 2016;15(7):2236-2251. doi:10.1074/mcp.M115.057703
• Dostálová A, Rommelaere S, Poidevin M, Lemaitre B. Thioester-containing proteins regulate the Toll pathway and play a role in Drosophila defence against microbial pathogens and parasitoid wasps. BMC Biol. 2017;15(1):79. Published 2017 Sep 5. doi:10.1186/s12915-017-0408-0
• Eulberg D, Buchner K, Maasch C, Klussmann S. Development of an automated in vitro selection protocol to obtain RNA-based aptamers: identification of a biostable substance P antagonist. Nucleic Acids Res. 2005;33(4):e45. Published 2005 Mar 3. doi:10.1093/nar/gni044
• Ford MM, Smythers AL, McConnell EW, Lowery SC, Kolling DRJ, Hicks LM. Inhibition of TOR in Chlamydomonas reinhardtii Leads to Rapid Cysteine Oxidation Reflecting Sustained Physiological Changes. Cells. 2019;8(10):1171. Published 2019 Sep 28. doi:10.3390/cells8101171
• Freitag, K., Sterczyk, N., Wendlinger, S. et al. Spermidine reduces neuroinflammation and soluble amyloid beta in an Alzheimer’s disease mouse model. J Neuroinflammation. 2022 19, 172. doi: 10.1186/s12974-022-02534-7
• Frey S, Görlich D. Purification of protein complexes of defined subunit stoichiometry using a set of orthogonal, tag-cleaving proteases. J Chromatogr A. 2014;1337:106-115. doi:10.1016/j.chroma.2014.02.030
• Frindert J, Zhang Y, Nübel G, et al. Identification, Biosynthesis, and Decapping of NAD-Capped RNAs in B. subtilis. Cell Rep. 2018;24(7):1890-1901.e8. doi:10.1016/j.celrep.2018.07.047
• Gandbhir O, Sundaram P. 'Amytrapper', a Novel Immobilized Sepharose API Matrix, Removes Amyloid-β from Circulation in vitro. J Alzheimers Dis Rep. 2019;3(1):19-29. Published 2019 Feb 4. doi:10.3233/ADR-180093
• Glittenberg M, Kounatidis I, Atilano M, Ligoxygakis P. A genetic screen in Drosophila reveals the role of fucosylation in host susceptibility to Candida infection [published online ahead of print, 2022 Feb 10]. Dis Model Mech. 2022;dmm.049218. doi:10.1242/dmm.049218
• González-Fortes G, Jones E, Lightfoot E et al. Paleogenomic Evidence for Multi-generational Mixing between Neolithic Farmers and Mesolithic Hunter-Gatherers in the Lower Danube Basin. Current Biology. 2017;27(12):1801-1810.e10. doi:10.1016/j.cub.2017.05.023
• Goossens J, De Geyter N, Walton A, et al. Isolation of protein complexes from the model legume Medicago truncatula by tandem affinity purification in hairy root cultures. Plant J. 2016;88(3):476-489. doi:10.1111/tpj.13258
• Gourgoulianni N, Schäfer M, Kapun M, et al. Temperature-dependent melanism and phenoloxidase activity in the dimorphic sepsid fly Sepsis thoracica. Journal of Thermal Biology. 2023;112. doi: doi.org/10.1016/j.jtherbio.2023.103473
• Grasso G, Sommella E.M, Merciai F, et al. Enhanced selective capture of phosphomonoester lipids enabling highly sensitive detection of sphingosine 1-phosphate. Anal Bioanal Chem. 2023. doi: 10.1007/s00216-023-04937-8
• Gu S, Kumar M, Sikorska B et al. Isolation and partial characterization of a highly divergent lineage of hantavirus from the European mole (Talpa europaea). Sci Rep. 2016;6(1). doi:10.1038/srep21119
• Hecht M, Rösler R, Wiese S, Johnsson N, Gronemeyer T. An Interaction Network of the Human SEPT9 Established by Quantitative Mass Spectrometry. G3 (Bethesda). 2019;9(6):1869-1880. Published 2019 Jun 5. doi:10.1534/g3.119.400197
• Ilavenil S, Al-Dhabi NA, Srigopalram S, et al. Removal of SDS from biological protein digests for proteomic analysis by mass spectrometry. Proteome Sci. 2016;14(1):11. Published 2016 Sep 6. doi:10.1186/s12953-016-0098-5
• Iqbal M, Poole E, Goodbourn S, McCauley JW. Role for bovine viral diarrhea virus Erns glycoprotein in the control of activation of beta interferon by double-stranded RNA. J Virol. 2004;78(1):136-145. doi:10.1128/jvi.78.1.136-145.2004
• Irvine SQ. Whole-mount in situ hybridization of small invertebrate embryos using laboratory mini-columns. Biotechniques. 2007;43(6):764-768. doi:10.2144/000112617
• Jappe EC, Garde C, Ramarathinam SH, et al. Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design. Nat Commun. 2020;11(1):6305. Published 2020 Dec 9. doi:10.1038/s41467-020-20166-4
• Kang HJ, Gu SH, Cook JA, Yanagihara R. Dahonggou Creek virus, a divergent lineage of hantavirus harbored by the long-tailed mole (Scaptonyx fusicaudus). Trop Med Health. 2016;44:16. Published 2016 Jun 20. doi:10.1186/s41182-016-0017-6
• Keil B. Tho1 is necessary for recruitment of transcription elongation factors and nuclear mRNP assembly. JLUpub. 2021. doi:10.22029/jlupub-448
• Kita Y, Miura Y, Furukawa J, et al. Quantitative glycomics of human whole serum glycoproteins based on the standardized protocol for liberating N-glycans. Mol Cell Proteomics. 2007;6(8):1437-1445. doi:10.1074/mcp.T600063-MCP200
• Koba R, Suzuki S, Sato G, et al. Identification and characterization of a novel bat polyomavirus in Japan [published online ahead of print, 2020 Aug 20]. Virus Genes. 2020;1-5. doi:10.1007/s11262-020-01789-7
• Kosmacz M, Gorka M, Schmidt S, et al. Protein and metabolite composition of Arabidopsis stress granules. New Phytol. 2019;222(3):1420-1433. doi:10.1111/nph.15690
• Kyriakakis P, Tipping M, Abed L, Veraksa A. Tandem affinity purification in Drosophila: the advantages of the GS-TAP system. Fly (Austin). 2008;2(4):229-235. doi:10.4161/fly.6669
• Lackner, A, Müller M, Gamperl, M, et al. The Fgf/Erf/NCoR1/2 repressive axis controls trophoblast cell fate. Nat Commun. 2023;14: 2559. doi: 10.1038/s41467-023-38101-8
• Leal-Esteban LC, Rothé B, Fortier S, Isenschmid M, Constam DB. Role of Bicaudal C1 in renal gluconeogenesis and its novel interaction with the CTLH complex. PLoS Genet. 2018;14(7):e1007487. Published 2018 Jul 11. doi:10.1371/journal.pgen.1007487
• Lifka S, Ponomarev I, Weth A, Baumgartner D, Lamprecht B, Baumgartner W. A simple and cheap aerosol penetrometer for filter testing using an electronic cigarette. Open Research Europe. 2021;1:5. doi:10.12688/openreseurope.13087.2
• Luzarowski M, Kosmacz M, Sokolowska E, et al. Affinity purification with metabolomic and proteomic analysis unravels diverse roles of nucleoside diphosphate kinases. J Exp Bot. 2017;68(13):3487-3499. doi:10.1093/jxb/erx183
• MacConnell AB, McEnaney PJ, Cavett VJ, Paegel BM. DNA-Encoded Solid-Phase Synthesis: Encoding Language Design and Complex Oligomer Library Synthesis. ACS Comb Sci. 2015;17(9):518-534. doi:10.1021/acscombsci.5b00106
• MacConnell AB, Price AK, Paegel BM. An Integrated Microfluidic Processor for DNA-Encoded Combinatorial Library Functional Screening. ACS Comb Sci. 2017;19(3):181-192. doi:10.1021/acscombsci.6b00192
• Majerská J, Redon S, Lingner J. Quantitative telomeric chromatin isolation protocol for human cells. Methods. 2017;114:28-38. doi:10.1016/j.ymeth.2016.08.003
• Marini F, Wood RD. A human DNA helicase homologous to the DNA cross-link sensitivity protein Mus308. J Biol Chem. 2002;277(10):8716-8723. doi:10.1074/jbc.M110271200
• Mattecka S, Brunner P, Hähnel B, Kunze R, Vogt B, Sheriff A. PentraSorb C-Reactive Protein: Characterization of the Selective C-Reactive Protein Adsorber Resin. Ther Apher Dial. 2019;23(5):474-481. doi:10.1111/1744-9987.12796
• Meier-Menches SM, Zappe K, Bileck A, et al. Time-dependent shotgun proteomics revealed distinct effects of an organoruthenium prodrug and its activation product on colon carcinoma cells. Metallomics. 2019;11(1):118-127. doi:10.1039/c8mt00152a
• Mitterer V, Hamze H, Kunowska N, et al. The RNA helicase Dbp10 coordinates assembly factor association with PTC maturation during ribosome biogenesis. Nucleic Acids Research. 2023. doi: 10.1093/nar/gkad1206
• Modak SS, Barber CA, Geva E, Abrams WR, Malamud D, Ongagna YS. Rapid Point-of-Care Isothermal Amplification Assay for the Detection of Malaria without Nucleic Acid Purification. Infect Dis (Auckl). 2016;9:1-9. Published 2016 Jan 20. doi:10.4137/IDRT.S32162
• Montellese C, Montel-Lehry N, Henras AK, Kutay U, Gleizes PE, O'Donohue MF. Poly(A)-specific ribonuclease is a nuclear ribosome biogenesis factor involved in human 18S rRNA maturation. Nucleic Acids Res. 2017;45(11):6822-6836. doi:10.1093/nar/gkx253
• Morici M, Gabrielli S, Fujiwara K, et al. RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity. Nat Commun. 2024; (15)2432. doi: 10.1038/s41467-024-46761-3
• Niederhoff K, Meindl-Beinker NM, Kerssen D, et al. Yeast Pex14p possesses two functionally distinct Pex5p and one Pex7p binding sites. J Biol Chem. 2005;280(42):35571-35578. doi:10.1074/jbc.M502460200
• Okuno Y, Yamazaki Y, Fukutomi H, et al. A Novel Surface Modification and Immobilization Method of Anti-CD25 Antibody on Nonwoven Fabric Filter Removing Regulatory T Cells Selectively. ACS Omega. 2019;5(1):772-780. Published 2019 Dec 30. doi:10.1021/acsomega.9b03494
• Ortega A, Niksic M, Bachi A, et al. Biochemical function of female-lethal (2)D/Wilms' tumor suppressor-1-associated proteins in alternative pre-mRNA splicing. J Biol Chem. 2003;278(5):3040-3047. doi:10.1074/jbc.M210737200
• Pabst TM, Wendeler M, Wang X, Bezemer S, Hermans P, Hunter AK. Camelid V_H H affinity ligands enable separation of closely related biopharmaceuticals. Biotechnol J. 2017;12(2):1600357. doi:10.1002/biot.201600357
• Paine-Saunders S, Viviano BL, Economides AN, Saunders S. Heparan sulfate proteoglycans retain Noggin at the cell surface: a potential mechanism for shaping bone morphogenetic protein gradients. J Biol Chem. 2002;277(3):2089-2096. doi:10.1074/jbc.M109151200
• Pearson RJ, Morf L, Singh U. Regulation of H2O2 stress-responsive genes through a novel transcription factor in the protozoan pathogen Entamoeba histolytica. J Biol Chem. 2013;288(6):4462-4474. doi:10.1074/jbc.M112.423467
• Peters S, Keller F. Frost tolerance in excised leaves of the common bugle (Ajuga reptans L.) correlates positively with the concentrations of raffinose family oligosaccharides (RFOs). Plant Cell Environ. 2009;32(8):1099-1107. doi:10.1111/j.1365-3040.2009.01991.x
• Riedel F, Galindo A, Muschalik N, Munro S. The two TRAPP complexes of metazoans have distinct roles and act on different Rab GTPases. J Cell Biol. 2018;217(2):601-617. doi:10.1083/jcb.201705068
• Roitinger E, Hofer M, Köcher T, et al. Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana. Mol Cell Proteomics. 2015;14(3):556-571. doi:10.1074/mcp.M114.040352
• Rössler I, Embacher J, Pillet B, et al. Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME. Nucleic Acids Res. 2019;47(13):6984-7002. doi:10.1093/nar/gkz317
• Saito Y, Harada A, Ushijima M, et al. Plasma cell differentiation is regulated by the expression of histone variant H3.3. Nat Commun. 2024; 5004 (15). doi: 10.1038/s41467-024-49375x
• Sancar G, Sancar C, Brunner M, Schafmeier T. Activity of the circadian transcription factor White Collar Complex is modulated by phosphorylation of SP-motifs. FEBS Lett. 2009;583(12):1833-1840. doi:10.1016/j.febslet.2009.04.042
• Schoppe J, Schubert E, Apelbaum A, et al. Flexible open conformation of the AP-3 complex explains its role in cargo recruitment at the Golgi. Journal of Biological Chemistry. 2021. doi:10.1016/j.jbc.2021.101334
• Shanmugabalaji V, Douet V, Agne B, Kessler F. Affinity Purification of Chloroplast Translocon Protein Complexes Using the TAP Tag. J Vis Exp. 2018;(141):10.3791/58532. Published 2018 Nov 1. doi:10.3791/58532
• Siniossoglou S, Hurt EC, Pelham HR. Psr1p/Psr2p, two plasma membrane phosphatases with an essential DXDX(T/V) motif required for sodium stress response in yeast. J Biol Chem. 2000;275(25):19352-19360. doi:10.1074/jbc.M001314200
• Smith F, Gabriel W. Embryonic Immunostaining for the Tardigrade Hypsibius exemplaris. Cold Spring Harb Protoc. 2018;2018(11):pdb.prot102343. doi:10.1101/pdb.prot102343
• Smythers AL, McConnell EW, Lewis HC, Mubarek SN, Hicks LM. Photosynthetic Metabolism and Nitrogen Reshuffling Are Regulated by Reversible Cysteine Thiol Oxidation Following Nitrogen Deprivation in Chlamydomonas. Plants (Basel). 2020;9(6):784. Published 2020 Jun 23. doi:10.3390/plants9060784
• Steiner A, Favre S, Mack M, et al. Dissecting the Nuclear Import of the Ribosomal Protein Rps2 (uS5). Biomolecules. 2023; 13(7):1127. doi: 10.3390/biom13071127
• Struk S, Braem L, Walton A, et al. Quantitative Tandem Affinity Purification, an Effective Tool to Investigate Protein Complex Composition in Plant Hormone Signaling: Strigolactones in the Spotlight. Front Plant Sci. 2018;9:528. Published 2018 Apr 26. doi:10.3389/fpls.2018.00528
• Tan JL, Ward L, Truscott KN, Dougan DA. The N-end rule adaptor protein ClpS from Plasmodium falciparum exhibits broad substrate specificity. FEBS Lett. 2016;590(19):3397-3406. doi:10.1002/1873-3468.12382
• Thomas JR, Brittain SM, Lipps J, Llamas L, Jain RK, Schirle M. A Photoaffinity Labeling-Based Chemoproteomics Strategy for Unbiased Target Deconvolution of Small Molecule Drug Candidates. Methods Mol Biol. 2017;1647:1-18. doi:10.1007/978-1-4939-7201-2_1
• Thoms M, Ahmed YL, Maddi K, Hurt E, Sinning I. Concerted removal of the Erb1-Ytm1 complex in ribosome biogenesis relies on an elaborate interface. Nucleic Acids Res. 2016;44(2):926-939. doi:10.1093/nar/gkv1365
• Vargas-Muñoz M, Danchana K, Cerdà V, Palacio E. Field-deployable method for iron analysis using a simple preconcentration procedure and a 3D portable spectrophotometric system. Microchemical Journal. 2021;170:106774. doi:10.1016/j.microc.2021.106774
• Vier J, Häcker G, Kirschnek, S. Contribution of A1 to macrophage survival in cooperation with MCL-1 and BCL-XL in a murine cell model of myeloid differentiation. Cell Death Dis. 2024; (15) 677. doi: 10.1038/s41419-024-07064-z
• Wang W. Applications of biophysical methods in small-molecule modulators targeting protein function. doi:10.33612/diss.156123664
• Weiße C, Dittmar D, Jakóbczak B, et al. Immunogenicity and protective efficacy of a Streptococcus suis vaccine composed of six conserved immunogens. Vet Res. 2021;52(1):112. Published 2021 Aug 25. doi:10.1186/s13567-021-00981-3
• Winkler L, Gehring C, Wenzel A, et al. Molecular determinants of the interaction between Clostridium perfringens enterotoxin fragments and claudin-3. J Biol Chem. 2009;284(28):18863-18872. doi:10.1074/jbc.M109.008623
• Wissing J, Jänsch L, Nimtz M, et al. Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry. Mol Cell Proteomics. 2007;6(3):537-547. doi:10.1074/mcp.T600062-MCP200
• Wolfram-Schauerte M, Pozhydaieva N, Grawenhoff J, et al. A viral ADP-ribosyltransferase attaches RNA chains to host proteins. Nature.2023. doi: 10.1038/s41586-023-06429-2
• Zhang J, Hu Z, Chung H.H., et al. Dependency of NELF-E-SLUG-KAT2B epigenetic axis in breast cancer carcinogenesis. Nat Commun. 2023;14: 2439. doi: 10.1038/s41467-023-38132-1