Solutions for DNA, RNA & Protein Purification and Stabilization
Insects
- Brown A, Lloyd V. Evidence for horizontal transfer of Wolbachia by a Drosophila mite. Experimental and Applied Acarology. 2015;66(3):301-311. doi:10.1007/s10493-015-9918-z
- Carey K, Nabbout A, Macnutt-Burrows E et al. Physiology and Behaviour of Ixodes Scapularis Infected with Bartonella spp. in Nova Scotia. Int J Biol. 2018;11(1):85. doi:10.5539/ijb.v11n1p85
- Curry E, Nabbout A, Kho J, D Entremont K, Jacks F, Rossolimo T. Effect of Bartonella spp. on the Freezing Tolerance in Female Ixodes scapularis. Int J Biol. 2017;9(3):65. doi:10.5539/ijb.v9n3p65
- Huber K, Schuldt K, Rudolf M, et al. Distribution and genetic structure of Aedes japonicus japonicus populations (Diptera: Culicidae) in Germany. Parasitol Res. 2014;113(9):3201-3210. doi:10.1007/s00436-014-4000-z
- Liu D. Handbook Of Nucleic Acid Purification. Boca Raton: CRC Press; 2009:308-309.
- Patterson J, Duncan A, McIntyre K, Lloyd V. Evidence for genetic hybridization between Ixodes scapularis and Ixodes cookei. Can J Zool. 2017;95(8):527-537. doi:10.1139/cjz-2016-0134
- Rudolf M, Czajka C, Börstler J, et al. First nationwide surveillance of Culex pipiens complex and Culex torrentium mosquitoes demonstrated the presence of Culex pipiens biotype pipiens/molestus hybrids in Germany. PLoS One. 2013;8(9):e71832. Published 2013 Sep 11. doi:10.1371/journal.pone.0071832
- Tóth V, Lakatos F. Phylogeographic pattern of the plane leaf miner, Phyllonorycter platani (STAUDINGER, 1870) (Lepidoptera: Gracillariidae) in Europe. BMC Evol Biol. 2018;18(1):135. Published 2018 Sep 6. doi:10.1186/s12862-018-1240-z
- Wills MKB, Kirby AM, Lloyd VK. Detecting the Lyme Disease Spirochete, Borrelia Burgdorferi, in Ticks Using Nested PCR. J Vis Exp. 2018;(132):56471. Published 2018 Feb 4. doi:10.3791/56471
Plants
- Éva C, Téglás F, Zelenyánszki H, et al. Cold inducible promoter driven Cre-lox system proved to be highly efficient for marker gene excision in transgenic barley. J Biotechnol. 2018;265:15-24. doi:10.1016/j.jbiotec.2017.10.016
- Han Y, Abair A, van der Zanden J, et al. Transcriptome-Wide Genetic Variations in the Legume Genus Leucaena for Fingerprinting and Breeding. Agronomy 2024; 14(7):1519. doi: 10.3390/agronomy14071519
- Kovar L, Nageswara-Rao M, Ortega-Rodriguez S, et al. PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing. Genome Biol Evol. 2018;10(9):2501-2517. Published 2018 Sep 1. doi:10.1093/gbe/evy179
- Morris WL, Hancock RD, Ducreux LJ, et al. Day length dependent restructuring of the leaf transcriptome and metabolome in potato genotypes with contrasting tuberization phenotypes. Plant Cell Environ. 2014;37(6):1351-1363. doi:10.1111/pce.12238
- Polgári D, Mihók E, Sági L. Composition and random elimination of paternal chromosomes in a large population of wheat × barley (Triticum aestivum L. × Hordeum vulgare L.) hybrids. Plant Cell Rep. 2019;38(6):767-775. doi:10.1007/s00299-019-02405-1
- Rakszegi M, Kisgyörgy B, Kiss T et al. Development and characterization of high-amylose wheat lines. Starch - Stärke. 2014;67(3-4):247-254. doi:10.1002/star.201400111
- Rigó G, Valkai I, Faragó D, et al. Gene mining in halophytes: functional identification of stress tolerance genes in Lepidium crassifolium. Plant Cell Environ. 2016;39(9):2074-2084. doi:10.1111/pce.12768
- Spaan RS, Epps CW, Crowhurst R, Whittaker D, Cox M, Duarte A. 2021. Impact of Mycoplasma ovipneumoniae on juvenile bighorn sheep (Ovis canadensis) survival in the northern Basin and Range ecosystem. PeerJ 9:e10710. doi: 10.7717/peerj.10710
- Trapero-Mozos A, Morris WL, Ducreux LJM, et al. Engineering heat tolerance in potato by temperature-dependent expression of a specific allele of HEAT-SHOCK COGNATE 70. Plant Biotechnol J. 2018;16(1):197-207. doi:10.1111/pbi.12760
Fecal Samples
- Castillo Vardaro JA, Epps CW, Frable BW, Ray C. Identification of a contact zone and hybridization for two subspecies of the American pika (Ochotona princeps) within a single protected area. PLoS One. 2018;13(7):e0199032. Published 2018 Jul 11. doi:10.1371/journal.pone.0199032
- Couch CE, Arnold HK, Crowhurst RS, et al. Bighorn sheep gut microbiomes associate with genetic and spatial structure across a metapopulation. Sci Rep. 2020;10(1):6582. Published 2020 Apr 20. doi:10.1038/s41598-020-63401-0
- Couch CE. From Microbes to Megafauna: The Ecology of Gut Microbiomes in Wild Herbivores. Oregon State University.
- Creech TG, Epps CW, Landguth EL, et al. Simulating the spread of selection-driven genotypes using landscape resistance models for desert bighorn sheep. PLoS One. 2017;12(5):e0176960. Published 2017 May 2. doi:10.1371/journal.pone.0176960
- Crowhurst R, Mullins T, Mutayoba B, Epps C. Characterization of eight polymorphic loci for Maasai giraffe (Giraffa camelopardalis tippelskirchi) using non-invasive genetic samples. Conserv Genet Resour. 2012;5(1):85-87. doi:10.1007/s12686-012-9739-x
- Kamath PL, Getz WM. Adaptive molecular evolution of the Major Histocompatibility Complex genes, DRA and DQA, in the genus Equus. BMC Evol Biol. 2011;11:128. Published 2011 May 18. doi:10.1186/1471-2148-11-128
- Nelson J. Using Spatial Capture-Recapture to Estimate Density of Roosevelt Elk in Western Oregon. Oregon State University.
- Pfeiler S. Monitoring Desert Ungulates via Fecal DNA-Based Capture Recapture. Utah State University.
Other Samples
- Barnard E, Nagy I, Hunyadkürti J, Patrick S, McDowell A. Multiplex touchdown PCR for rapid typing of the opportunistic pathogen Propionibacterium acnes. J Clin Microbiol. 2015;53(4):1149-1155. doi:10.1128/JCM.02460-14
- Bleckmann M, Fritz MH, Bhuju S, et al. Genomic Analysis and Isolation of RNA Polymerase II Dependent Promoters from Spodoptera frugiperda. PLoS One. 2015;10(8):e0132898. Published 2015 Aug 11. doi:10.1371/journal.pone.0132898
- Boi S, Ferrell ME, Zhao M, Hasenkrug KJ, Evans LH. Mouse APOBEC3 expression in NIH 3T3 cells mediates hypermutation of AKV murine leukemia virus. Virology. 2018;518:377-384. doi:10.1016/j.virol.2018.03.014
- Boi S, Rosenke K, Hansen E, Hendrick D, Malik F, Evans L. Endogenous retroviruses mobilized during friend murine leukemia virus infection. Virology. 2016;499:136-143. doi:10.1016/j.virol.2016.07.009
- Chee SY. Limitations of cytochrome oxidase I for the barcoding of Neritidae (Mollusca: Gastropoda) as revealed by Bayesian analysis. Genet Mol Res. 2015;14(2):5677-5684. Published 2015 May 25. doi:10.4238/2015.May.25.20
- Eagle SH, Crease TJ. Copy number variation of ribosomal DNA and Pokey transposons in natural populations of Daphnia. Mob DNA. 2012;3(1):4. Published 2012 Mar 5. doi:10.1186/1759-8753-3-4
- Harrer L, Levi T. The primacy of bears as seed dispersers in salmon‐bearing ecosystems. Ecosphere. 2018;9(1). doi:10.1002/ecs2.2076
- Jamsari AF, Jamaluddin JA, Pau TM, Siti-Azizah MN. Genetic structure of the snakehead murrel, Channa striata (channidae) based on the cytochrome c oxidase subunit I gene: Influence of historical and geomorphological factors. Genet Mol Biol. 2011;34(1):152-160. doi:10.1590/S1415-47572011000100026
- Knör M, Tziridis K, Agaimy A, Zenk J, Wendler O. Human Papillomavirus (HPV) Prevalence in Nasal and Antrochoanal Polyps and Association with Clinical Data. PLoS One. 2015;10(10):e0141722. Published 2015 Oct 28. doi:10.1371/journal.pone.0141722
- Melis R, Mohamed J, Ha Y, Lyon E, McMillin G. Postmortem CYP2D6 Genotyping and Copy Number Determinations Using DNA Extracted from Archived FTA Bloodstains. J Anal Toxicol. 2019;43(5):411-414. doi:10.1093/jat/bkz008
- Melvin R, Campbell SC. The effects of exercise and estrogen on gut microbiota in female mice. Rutgers University.
- Middelveen M, Rotaru G, McMurray J, Filush K. Canine Filamentous Dermatitis Associated with Borrelia Infection. J Vet Sci Med Diagn. 2016;05(06). doi:10.4172/2325-9590.1000212
- Roller M, Lucić V, Nagy I, Perica T, Vlahovicek K. Environmental shaping of codon usage and functional adaptation across microbial communities. Nucleic Acids Res. 2013;41(19):8842-8852. doi:10.1093/nar/gkt673
- Sperling J, Silva-Brandão K, Brandão M et al. Comparison of bacterial 16S rRNA variable regions for microbiome surveys of ticks. Ticks Tick Borne Dis. 2017;8(4):453-461. doi:10.1016/j.ttbdis.2017.02.002
- Such N, Farkas V, Csitári G et al. Relative Effects of Dietary Administration of a Competitive Exclusion Culture and a Synbiotic Product, Age and Sampling Site on Intestinal Microbiota Maturation in Broiler Chickens. Vet Sci. 2021;8(9):187. doi:10.3390/vetsci8090187
- Szvetnik A, Bihari Z, Szabó Z, Kelemen O, Kiss I. Genetic manipulation tools for Dietzia spp. J Appl Microbiol. 2010;109(5):1845-1852. doi:10.1111/j.1365-2672.2010.04818.x
- Tan M, Hamzah M, Ghaffar M. A preliminary genetic baseline data of chacunda gizzard shad, Anodontostoma chacunda in Setiu Wetlands, Terengganu, Malaysia. Journal of Sustainability Science and Management. 2017;(3):23-28.
- Tan M, Jamsari A, Muchlisin Z, Siti Azizah M. Mitochondrial genetic variation and population structure of the striped snakehead, Channa striata in Malaysia and Sumatra, Indonesia. Biochem Syst Ecol. 2015;60:99-105. doi:10.1016/j.bse.2015.04.006
- Wheat RE, Allen JM, Miller SD, Wilmers CC, Levi T. Environmental DNA from Residual Saliva for Efficient Noninvasive Genetic Monitoring of Brown Bears (Ursus arctos). PLoS One. 2016;11(11):e0165259. Published 2016 Nov 9. doi:10.1371/journal.pone.0165259
- Zinck CB, Lloyd VK. Borrelia burgdorferi and Borrelia miyamotoi in Atlantic Canadian wildlife. PLoS One. 2022;17(1):e0262229. Published 2022 Jan 21. doi:10.1371/journal.pone.0262229
- Al-Masaudi S, El Kaoutari A, Drula E, Redwan EM, Lombard V, Henrissat B. A metagenomics investigation of carbohydrate-active enzymes along the goat and camel intestinal tract. Int Microbiol. 2019;22(4):429-435. doi:10.1007/s10123-019-00068-2
- Chen Z, Mantha RR, Chen JS, Slivano OJ, Takahashi H. Non-invasive genotyping of transgenic animals using fecal DNA. Lab Anim (NY). 2012;41(4):102-107. Published 2012 Mar 20. doi:10.1038/laban0412-102
- Deakin S, Gorrell J, Kneteman J, Hik D, Jobin R, Coltman D. Spatial genetic structure of Rocky Mountain bighorn sheep (Ovis canadensis canadensis) at the northern limit of their native range. Can J Zool. 2020;98(5):317-330. doi:10.1139/cjz-2019-0183
- Frémont M, Coomans D, Massart S, De Meirleir K. High-throughput 16S rRNA gene sequencing reveals alterations of intestinal microbiota in myalgic encephalomyelitis/chronic fatigue syndrome patients. Anaerobe. 2013;22:50-56. doi:10.1016/j.anaerobe.2013.06.002
- Hunt PW, Lello J. How to make DNA count: DNA-based diagnostic tools in veterinary parasitology. Vet Parasitol. 2012;186(1-2):101-108. doi:10.1016/j.vetpar.2011.11.055
- Millan BT. Fecal Microbial Transplantation and its Expansion into the Treatment of Other Diseases. University of Alberta.
- Rajaruban S. The Role of High Sugar Diets in Colitis. University of Alberta.
- Zhang Z, Hyun JE, Thiesen A, et al. Sex-Specific Differences in the Gut Microbiome in Response to Dietary Fiber Supplementation in IL-10-Deficient Mice. Nutrients. 2020;12(7):2088. Published 2020 Jul 15. doi:10.3390/nu12072088
- Conti T, Buel E. Forensic Stain Identification By RT-PCR Analysis (Updated). National Institute of Justice.
- Köster N, Schmiermund A, Grubelnig S, et al. Single-Step RNA Extraction from Different Hydrogel-Embedded Mesenchymal Stem Cells for Quantitative Reverse Transcription-Polymerase Chain Reaction Analysis. Tissue Eng Part C Methods. 2016;22(6):552-560. doi:10.1089/ten.TEC.2015.0362
- Matteson AR. Quantification and Ecological Perspectives on Cyanophage and Aquatic Viruses. University of Tennessee.
- Melvin R, Campbell SC. The effects of exercise and estrogen on gut microbiota in female mice. Rutgers University.
- Arang A, Lubrano S, Ceribelli M, et al. High-throughput chemogenetic drug screening reveals PKC-RhoA/PKN as a targetable signaling vulnerability in GNAQ-driven uveal melanoma. Cell Reports. 2023. doi: /10.1016/j.xcrm.2023.101244
